For anyone wondering, the museum is counting up in binary using 8 bits. Each half-leaf counts as 1 bit. The first bit is the bottom half of the top right leaf, and goes upwards clockwise from there. if you're missing a certain entry in the museum, add or remove that first bit from the entry on either side to see what specific clover you need. To breed for it, just breed clovers together that share high-level mutations with the one you want to breed, but no high-level mutations where the chosen clover's low-level leafs are.
When you have a water pump or meal extractor, does it only count the area immediately under the building, or the around it too? I assumed that the area around it was the area that it was mining, but now I'm not so sure...
You can now reset your meta-energy upgrades in the Shops tab.